Dr. XUE JIN
 
 
First Name
XUE
Last Name
JIN
University/Institution
Yale university
Email ID
xue.jin@yale.edu
City
new haven
Country
United States
State
Connecticut
Zip code
06510
Department
neurosurgery
Area of Research
cancer biology and innate immunity
Area of Expertise
extrachromosomal RNA and extracellular vesicles
Brief Description of Research Interest:
 

I am currently interested in investigating the regulation of extrachromosomal DNA amplifications (ecDNA) in cancer cells, as they are significant contributors to tumor pathogenesis, heterogeneity, and evolution, often leading to poor patient outcomes. My focus lies in unraveling the molecular drivers involved in ecDNA replication and the formation-dissociation cycle of ecDNA hubs, utilizing proximity labeling-based proteomic profiling. Additionally, I am dedicated to identifying shared features among general ecDNAs. Ultimately, my aim is to develop tools for ecDNA research and to devise novel therapeutic strategies targeting ecDNA-mediated oncogenesis.

In my graduate work, I concentrated on understanding the role of extracellular vesicles (EVs) in mediating the innate immune response. EVs, lipid-encapsulated vesicles secreted by various cell types, serve as important mediators in intercellular communication. Employing techniques such as super-resolution microscopy, mass spectrometry, and transmission electron microscopy, I investigated the mechanisms underlying EV biogenesis and uptake during Toll-like receptor (TLR) 9 activation and lipopolysaccharide (LPS) infection.

I am currently interested in investigating the regulation of extrachromosomal DNA amplifications (ecDNA) in cancer cells, as they are significant contributors to tumor pathogenesis, heterogeneity, and evolution, often leading to poor patient outcomes. My focus lies in unraveling the molecular drivers involved in ecDNA replication and the formation-dissociation cycle of ecDNA hubs, utilizing proximity labeling-based proteomic profiling. Additionally, I am dedicated to identifying shared features among general ecDNAs. Ultimately, my aim is to develop tools for ecDNA research and to devise novel therapeutic strategies targeting ecDNA-mediated oncogenesis.

In my graduate work, I concentrated on understanding the role of extracellular vesicles (EVs) in mediating the innate immune response. EVs, lipid-encapsulated vesicles secreted by various cell types, serve as important mediators in intercellular communication. Employing techniques such as super-resolution microscopy, mass spectrometry, and transmission electron microscopy, I investigated the mechanisms underlying EV biogenesis and uptake during Toll-like receptor (TLR) 9 activation and lipopolysaccharide (LPS) infection. Notably, my research on EV-mediated TLR9 activation has been published in Science Advances, with the final part accepted by the Journal of Extracellular Vesicles.

 
Representative Publications:
 

1. Jin X., Xia T., Luo S., Zhang Y., Xia Y., *Yin H. Exosomal lipid PI4P regulates extracellular vesicles secretion by modulating intraluminal vesicles formation. J Extracell Vesicles 2023, 4, e12319.

2. Xia T., Jin X., Zhang D., Wang J., Jian R., Yin H., *Xia Y. Alternative fatty acid desaturation pathways revealed by deep profiling of total fatty acids in RAW264.7 cell line. J Lipid Res2023, 64:100410

3. Zhang Y., Jin X.; Liang J., Guo Y., Sun G., Zeng X., *Yin H. Extracellular vesicles derived from ODN-stimulated macrophages transfer and activate Cdc42 in recipient cells and thereby increase cellular permissiveness to EV uptake. Science Advances2019, 5, eaav1564

4. Xia T., Zhou F., Zhang D., Jin X., Shi H., Yin H., Gong Y., *Xia Y. Deep-profiling of phospholipidome via rapid orthogonal separations and isomer-resolving mass spectrometry. Nat Commun2023, 14:4263

5. Shi C.#, Yang X.#, Hou Y., Jin X., Guo L., Zhou Y., Zhang C., *Yin H. USP15 promotes cGAS activation through deubiquitylation and liquid condensation. Nucleic Acids Res. 2022: gkac823.

6. Zhang Y., Xiao Y., Sun G., Jin X., Guo L., Li T., *Yin H. Harnessing the therapeutic potential of extracellular vesicles for cancer treatment. Semin Cancer Biol. 2021, 74:92-104s